3D structure

PDB id
7BL4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7BL4|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL4|1|A|C|817
7BL4|1|A|G|818
7BL4|1|A|A|819
7BL4|1|A|A|820
7BL4|1|A|A|821
7BL4|1|A|G|822
*
7BL4|1|A|C|835
7BL4|1|A|G|836
7BL4|1|A|C|837
7BL4|1|A|C|838
*
7BL4|1|A|G|940
7BL4|1|A|A|941
7BL4|1|A|G|942
7BL4|1|A|A|943
7BL4|1|A|C|944
7BL4|1|A|A|945
7BL4|1|A|C|946
*
7BL4|1|A|G|971
7BL4|1|A|A|972
7BL4|1|A|A|973
7BL4|1|A|G|974
7BL4|1|A|A|975
7BL4|1|A|G|976
*
7BL4|1|A|C|987
7BL4|1|A|A|988
7BL4|1|A|G|989
7BL4|1|A|A|990
7BL4|1|A|C|991
*
7BL4|1|A|G|1163
7BL4|1|A|C|1164
*
7BL4|1|A|G|1185
7BL4|1|A|G|1186
7BL4|1|A|G|1187
7BL4|1|A|U|1188
7BL4|1|A|A|1189
7BL4|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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