3D structure

PDB id
7BL5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7BL5|1|A|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL5|1|A|C|8
7BL5|1|A|G|9
7BL5|1|A|A|10
7BL5|1|A|C|11
7BL5|1|A|U|12
7BL5|1|A|A|13
7BL5|1|A|A|14
7BL5|1|A|G|15
*
7BL5|1|A|U|525
7BL5|1|A|A|526
7BL5|1|A|C|527
7BL5|1|A|A|528
7BL5|1|A|A|529
7BL5|1|A|G|530
7BL5|1|A|C|531
*
7BL5|1|A|G|2018
7BL5|1|A|A|2019
7BL5|1|A|A|2020
7BL5|1|A|C|2021
7BL5|1|A|U|2022
7BL5|1|A|C|2023
*
7BL5|1|A|G|2040
7BL5|1|A|U|2041
7BL5|1|A|A|2042
7BL5|1|A|C|2043
*
7BL5|1|A|G|2625
7BL5|1|A|C|2626
7BL5|1|A|G|2627
7BL5|1|A|C|2628
7BL5|1|A|U|2629
7BL5|1|A|G|2630
*
7BL5|1|A|C|2788
7BL5|1|A|C|2789
*
7BL5|1|A|G|2894
7BL5|1|A|G|2895

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 0
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain S
50S ribosomal protein L22

Coloring options:

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