3D structure

PDB id
7BL5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7BL5|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL5|1|A|C|817
7BL5|1|A|G|818
7BL5|1|A|A|819
7BL5|1|A|A|820
7BL5|1|A|A|821
7BL5|1|A|G|822
*
7BL5|1|A|C|835
7BL5|1|A|G|836
7BL5|1|A|C|837
7BL5|1|A|C|838
*
7BL5|1|A|G|940
7BL5|1|A|A|941
7BL5|1|A|G|942
7BL5|1|A|A|943
7BL5|1|A|C|944
7BL5|1|A|A|945
7BL5|1|A|C|946
*
7BL5|1|A|G|971
7BL5|1|A|A|972
7BL5|1|A|A|973
7BL5|1|A|G|974
7BL5|1|A|A|975
7BL5|1|A|G|976
*
7BL5|1|A|C|987
7BL5|1|A|A|988
7BL5|1|A|G|989
7BL5|1|A|A|990
7BL5|1|A|C|991
*
7BL5|1|A|G|1163
7BL5|1|A|C|1164
*
7BL5|1|A|G|1185
7BL5|1|A|G|1186
7BL5|1|A|G|1187
7BL5|1|A|U|1188
7BL5|1|A|A|1189
7BL5|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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