J7_7CPV_001
3D structure
- PDB id
- 7CPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse testis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7CPV|1|L5|G|1657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPV|1|L5|C|1480
7CPV|1|L5|G|1481
7CPV|1|L5|A|1482
7CPV|1|L5|A|1483
7CPV|1|L5|G|1484
7CPV|1|L5|U|1485
*
7CPV|1|L5|A|1498
7CPV|1|L5|G|1499
*
7CPV|1|L5|U|1655
7CPV|1|L5|G|1656
7CPV|1|L5|G|1657
7CPV|1|L5|G|1658
*
7CPV|1|L5|C|1682
7CPV|1|L5|G|1683
7CPV|1|L5|C|1684
7CPV|1|L5|U|1685
7CPV|1|L5|G|1686
7CPV|1|L5|C|1687
*
7CPV|1|L5|G|1698
7CPV|1|L5|A|1699
7CPV|1|L5|A|1700
7CPV|1|L5|C|1701
7CPV|1|L5|G|1702
*
7CPV|1|L5|C|1880
7CPV|1|L5|C|1881
*
7CPV|1|L5|G|2035
7CPV|1|L5|A|2036
7CPV|1|L5|G|2037
7CPV|1|L5|U|2038
7CPV|1|L5|A|2039
7CPV|1|L5|G|2040
Current chains
- Chain L5
- Mus musculus 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LC
- 60S ribosomal protein L4
- Chain LF
- 60S ribosomal protein L7
- Chain LL
- 60S ribosomal protein L13
- Chain LQ
- 60S ribosomal protein L18
- Chain LT
- 60S ribosomal protein L21
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- 60S ribosomal protein L29
- Chain Le
- 60S ribosomal protein L32
- Chain Lf
- 60S ribosomal protein L35a
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