3D structure

PDB id
7K00 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome at 2 Angstrom Resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
1.98 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7K00|1|a|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K00|1|a|C|817
7K00|1|a|G|818
7K00|1|a|A|819
7K00|1|a|A|820
7K00|1|a|A|821
7K00|1|a|G|822
*
7K00|1|a|C|835
7K00|1|a|G|836
7K00|1|a|C|837
7K00|1|a|C|838
*
7K00|1|a|G|940
7K00|1|a|A|941
7K00|1|a|G|942
7K00|1|a|A|943
7K00|1|a|C|944
7K00|1|a|A|945
7K00|1|a|C|946
*
7K00|1|a|G|971
7K00|1|a|A|972
7K00|1|a|A|973
7K00|1|a|G|974
7K00|1|a|A|975
7K00|1|a|G|976
*
7K00|1|a|C|987
7K00|1|a|A|988
7K00|1|a|G|989
7K00|1|a|A|990
7K00|1|a|C|991
*
7K00|1|a|G|1163
7K00|1|a|C|1164
*
7K00|1|a|G|1185
7K00|1|a|G|1186
7K00|1|a|G|1187
7K00|1|a|U|1188
7K00|1|a|A|1189
7K00|1|a|G|1190

Current chains

Chain a
23S rRNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain b
5S ribosomal RNA; 5S rRNA
Chain k
50S ribosomal protein L15
Chain p
50S ribosomal protein L20
Chain q
50S ribosomal protein L21
Chain y
50S ribosomal protein L30

Coloring options:

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