3D structure

PDB id
7K53 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7K53|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K53|1|1|C|8
7K53|1|1|G|9
7K53|1|1|A|10
7K53|1|1|C|11
7K53|1|1|U|12
7K53|1|1|A|13
7K53|1|1|A|14
7K53|1|1|G|15
*
7K53|1|1|U|525
7K53|1|1|A|526
7K53|1|1|C|527
7K53|1|1|A|528
7K53|1|1|A|529
7K53|1|1|G|530
7K53|1|1|C|531
*
7K53|1|1|G|2018
7K53|1|1|A|2019
7K53|1|1|A|2020
7K53|1|1|C|2021
7K53|1|1|U|2022
7K53|1|1|C|2023
*
7K53|1|1|G|2040
7K53|1|1|U|2041
7K53|1|1|A|2042
7K53|1|1|C|2043
*
7K53|1|1|G|2625
7K53|1|1|C|2626
7K53|1|1|G|2627
7K53|1|1|C|2628
7K53|1|1|U|2629
7K53|1|1|G|2630
*
7K53|1|1|C|2788
7K53|1|1|C|2789
*
7K53|1|1|G|2894
7K53|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L32
Chain c
50S ribosomal protein L3
Chain j
50S ribosomal protein L13
Chain q
50S ribosomal protein L20
Chain s
50S ribosomal protein L22

Coloring options:

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