3D structure

PDB id
7LV0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
7LV0|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7LV0|1|1|C|817
7LV0|1|1|G|818
7LV0|1|1|A|819
7LV0|1|1|A|820
7LV0|1|1|A|821
7LV0|1|1|G|822
*
7LV0|1|1|C|835
7LV0|1|1|G|836
7LV0|1|1|C|837
*
7LV0|1|1|G|942
7LV0|1|1|A|943
7LV0|1|1|C|944
7LV0|1|1|A|945
7LV0|1|1|C|946
*
7LV0|1|1|G|971
7LV0|1|1|A|972
7LV0|1|1|A|973
7LV0|1|1|G|974
7LV0|1|1|A|975
7LV0|1|1|G|976
*
7LV0|1|1|C|987
7LV0|1|1|A|988
7LV0|1|1|G|989
7LV0|1|1|A|990
7LV0|1|1|C|991
*
7LV0|1|1|G|1163
7LV0|1|1|C|1164
*
7LV0|1|1|G|1185
7LV0|1|1|G|1186
7LV0|1|1|G|1187
7LV0|1|1|U|1188
7LV0|1|1|A|1189
7LV0|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 2
5S ribosomal RNA; 5S rRNA
Chain E
50S ribosomal protein L35
Chain l
50S ribosomal protein L15
Chain q
50S ribosomal protein L20
Chain r
50S ribosomal protein L21
Chain z
50S ribosomal protein L30

Coloring options:

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