3D structure

PDB id
7LVK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cfr-modified 50S subunit from Escherichia coli
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7LVK|1|I|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7LVK|1|I|C|817
7LVK|1|I|G|818
7LVK|1|I|A|819
7LVK|1|I|A|820
7LVK|1|I|A|821
7LVK|1|I|G|822
*
7LVK|1|I|C|835
7LVK|1|I|G|836
7LVK|1|I|C|837
7LVK|1|I|C|838
*
7LVK|1|I|G|940
7LVK|1|I|A|941
7LVK|1|I|G|942
7LVK|1|I|A|943
7LVK|1|I|C|944
7LVK|1|I|A|945
7LVK|1|I|C|946
*
7LVK|1|I|G|971
7LVK|1|I|A|972
7LVK|1|I|A|973
7LVK|1|I|G|974
7LVK|1|I|A|975
7LVK|1|I|G|976
*
7LVK|1|I|C|987
7LVK|1|I|A|988
7LVK|1|I|G|989
7LVK|1|I|A|990
7LVK|1|I|C|991
*
7LVK|1|I|G|1163
7LVK|1|I|C|1164
*
7LVK|1|I|G|1185
7LVK|1|I|G|1186
7LVK|1|I|G|1187
7LVK|1|I|U|1188
7LVK|1|I|A|1189
7LVK|1|I|G|1190

Current chains

Chain I
23S rRNA

Nearby chains

Chain J
5S ribosomal RNA; 5S rRNA
Chain T
50S ribosomal protein L15
Chain Y
50S ribosomal protein L20
Chain Z
50S ribosomal protein L21
Chain h
50S ribosomal protein L30
Chain l
50S ribosomal protein L35

Coloring options:

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