3D structure

PDB id
7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAG*CAAGAG*CAGAC*GA*UGGUAG
Length
36 nucleotides
Bulged bases
7M4Y|1|A|A|942
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7M4Y|1|A|C|815
7M4Y|1|A|G|816
7M4Y|1|A|A|817
7M4Y|1|A|A|818
7M4Y|1|A|A|819
7M4Y|1|A|G|820
*
7M4Y|1|A|C|833
7M4Y|1|A|G|834
7M4Y|1|A|C|835
7M4Y|1|A|C|836
*
7M4Y|1|A|G|937
7M4Y|1|A|A|938
7M4Y|1|A|G|939
7M4Y|1|A|A|940
7M4Y|1|A|C|941
7M4Y|1|A|A|942
7M4Y|1|A|G|943
*
7M4Y|1|A|C|968
7M4Y|1|A|A|969
7M4Y|1|A|A|970
7M4Y|1|A|G|971
7M4Y|1|A|A|972
7M4Y|1|A|G|973
*
7M4Y|1|A|C|984
7M4Y|1|A|A|985
7M4Y|1|A|G|986
7M4Y|1|A|A|987
7M4Y|1|A|C|988
*
7M4Y|1|A|G|1161
7M4Y|1|A|A|1162
*
7M4Y|1|A|U|1180
7M4Y|1|A|G|1181
7M4Y|1|A|G|1182
7M4Y|1|A|U|1183
7M4Y|1|A|A|1184
7M4Y|1|A|G|1185

Current chains

Chain A
23s ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain K
50S ribosomal protein L15
Chain P
50S ribosomal protein L20
Chain Q
50S ribosomal protein L21
Chain Y
50S ribosomal protein L30

Coloring options:

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