3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7N1P|1|23|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7N1P|1|23|C|817
7N1P|1|23|G|818
7N1P|1|23|A|819
7N1P|1|23|A|820
7N1P|1|23|A|821
7N1P|1|23|G|822
*
7N1P|1|23|C|835
7N1P|1|23|G|836
7N1P|1|23|C|837
7N1P|1|23|C|838
*
7N1P|1|23|G|940
7N1P|1|23|A|941
7N1P|1|23|G|942
7N1P|1|23|A|943
7N1P|1|23|C|944
7N1P|1|23|A|945
7N1P|1|23|C|946
*
7N1P|1|23|G|971
7N1P|1|23|A|972
7N1P|1|23|A|973
7N1P|1|23|G|974
7N1P|1|23|A|975
7N1P|1|23|G|976
*
7N1P|1|23|C|987
7N1P|1|23|A|988
7N1P|1|23|G|989
7N1P|1|23|A|990
7N1P|1|23|C|991
*
7N1P|1|23|G|1163
7N1P|1|23|C|1164
*
7N1P|1|23|G|1185
7N1P|1|23|G|1186
7N1P|1|23|G|1187
7N1P|1|23|U|1188
7N1P|1|23|A|1189
7N1P|1|23|G|1190

Current chains

Chain 23
23S rRNA

Nearby chains

Chain 5
5S ribosomal RNA; 5S rRNA
Chain LO
50S ribosomal protein L15
Chain LT
50S ribosomal protein L20
Chain LU
50S ribosomal protein L21
Chain Ld
50S ribosomal protein L30
Chain Li
50S ribosomal protein L35

Coloring options:

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