J7_7N2V_002

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

7N2V|1|23|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N2V|1|23|C|817
7N2V|1|23|G|818
7N2V|1|23|A|819
7N2V|1|23|A|820
7N2V|1|23|A|821
7N2V|1|23|G|822
*
7N2V|1|23|C|835
7N2V|1|23|G|836
7N2V|1|23|C|837
7N2V|1|23|C|838
*
7N2V|1|23|G|940
7N2V|1|23|A|941
7N2V|1|23|G|942
7N2V|1|23|A|943
7N2V|1|23|C|944
7N2V|1|23|A|945
7N2V|1|23|C|946
*
7N2V|1|23|G|971
7N2V|1|23|A|972
7N2V|1|23|A|973
7N2V|1|23|G|974
7N2V|1|23|A|975
7N2V|1|23|G|976
*
7N2V|1|23|C|987
7N2V|1|23|A|988
7N2V|1|23|G|989
7N2V|1|23|A|990
7N2V|1|23|C|991
*
7N2V|1|23|G|1163
7N2V|1|23|C|1164
*
7N2V|1|23|G|1185
7N2V|1|23|G|1186
7N2V|1|23|G|1187
7N2V|1|23|U|1188
7N2V|1|23|A|1189
7N2V|1|23|G|1190

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain LO

50S ribosomal protein L15

Chain LT

50S ribosomal protein L20

Chain LU

50S ribosomal protein L21

Chain Ld

50S ribosomal protein L30

Chain Li

50S ribosomal protein L35