J7_7N8B_001
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CGAAGUUU*AUAG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 35 nucleotides
- Bulged bases
- 7N8B|1|A1|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7N8B|1|A1|C|949
7N8B|1|A1|G|950
7N8B|1|A1|A|951
7N8B|1|A1|A|952
7N8B|1|A1|G|953
7N8B|1|A1|U|954
7N8B|1|A1|U|955
7N8B|1|A1|U|956
*
7N8B|1|A1|A|965
7N8B|1|A1|U|966
7N8B|1|A1|A|967
7N8B|1|A1|G|968
*
7N8B|1|A1|U|1114
7N8B|1|A1|G|1115
7N8B|1|A1|G|1116
7N8B|1|A1|G|1117
*
7N8B|1|A1|C|1141
7N8B|1|A1|G|1142
7N8B|1|A1|A|1143
7N8B|1|A1|U|1144
7N8B|1|A1|G|1145
7N8B|1|A1|C|1146
*
7N8B|1|A1|G|1157
7N8B|1|A1|A|1158
7N8B|1|A1|A|1159
7N8B|1|A1|C|1160
7N8B|1|A1|G|1161
*
7N8B|1|A1|C|1338
7N8B|1|A1|C|1339
*
7N8B|1|A1|G|1365
7N8B|1|A1|A|1366
7N8B|1|A1|G|1367
7N8B|1|A1|U|1368
7N8B|1|A1|A|1369
7N8B|1|A1|G|1370
Current chains
- Chain A1
- 25S
Nearby chains
- Chain A3
- 5S ribosomal RNA; 5S rRNA
- Chain AC
- 60S ribosomal protein L4-A
- Chain AF
- 60S ribosomal protein L7-A
- Chain AL
- 60S ribosomal protein L13-A
- Chain AQ
- 60S ribosomal protein L18-A
- Chain AT
- 60S ribosomal protein L21-A
- Chain Aa
- 60S ribosomal protein L28
- Chain Ab
- 60S ribosomal protein L29
- Chain Ae
- 60S ribosomal protein L32
- Chain Af
- 60S ribosomal protein L33-A
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