J7_7NHK_001
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAUAAG*UACAACA*UUAGUA*UUAC*GCGUUG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 7NHK|1|A|C|568, 7NHK|1|A|G|2034
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NHK|1|A|U|8
7NHK|1|A|G|9
7NHK|1|A|A|10
7NHK|1|A|A|11
7NHK|1|A|U|12
7NHK|1|A|A|13
7NHK|1|A|A|14
7NHK|1|A|G|15
*
7NHK|1|A|U|563
7NHK|1|A|A|564
7NHK|1|A|C|565
7NHK|1|A|A|566
7NHK|1|A|A|567
7NHK|1|A|C|568
7NHK|1|A|A|569
*
7NHK|1|A|U|2031
7NHK|1|A|U|2032
7NHK|1|A|A|2033
7NHK|1|A|G|2034
7NHK|1|A|U|2035
7NHK|1|A|A|2036
*
7NHK|1|A|U|2053
7NHK|1|A|U|2054
7NHK|1|A|A|2055
7NHK|1|A|C|2056
*
7NHK|1|A|G|2638
7NHK|1|A|C|2639
7NHK|1|A|G|2640
7NHK|1|A|U|2641
7NHK|1|A|U|2642
7NHK|1|A|G|2643
*
7NHK|1|A|C|2801
7NHK|1|A|C|2802
*
7NHK|1|A|G|2903
7NHK|1|A|A|2904
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain H
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L13
- Chain T
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L22
Coloring options: