3D structure

PDB id
7NSP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
7NSP|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NSP|1|A|C|817
7NSP|1|A|G|818
7NSP|1|A|A|819
7NSP|1|A|A|820
7NSP|1|A|A|821
7NSP|1|A|G|822
*
7NSP|1|A|C|835
7NSP|1|A|G|836
7NSP|1|A|C|837
*
7NSP|1|A|G|942
7NSP|1|A|A|943
7NSP|1|A|C|944
7NSP|1|A|A|945
7NSP|1|A|C|946
*
7NSP|1|A|G|971
7NSP|1|A|A|972
7NSP|1|A|A|973
7NSP|1|A|G|974
7NSP|1|A|A|975
7NSP|1|A|G|976
*
7NSP|1|A|C|987
7NSP|1|A|A|988
7NSP|1|A|G|989
7NSP|1|A|A|990
7NSP|1|A|C|991
*
7NSP|1|A|G|1163
7NSP|1|A|C|1164
*
7NSP|1|A|G|1185
7NSP|1|A|G|1186
7NSP|1|A|G|1187
7NSP|1|A|U|1188
7NSP|1|A|A|1189
7NSP|1|A|G|1190

Current chains

Chain A
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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