3D structure

PDB id
7NWT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.66 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7NWT|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWT|1|1|C|8
7NWT|1|1|G|9
7NWT|1|1|A|10
7NWT|1|1|C|11
7NWT|1|1|U|12
7NWT|1|1|A|13
7NWT|1|1|A|14
7NWT|1|1|G|15
*
7NWT|1|1|U|525
7NWT|1|1|A|526
7NWT|1|1|C|527
7NWT|1|1|A|528
7NWT|1|1|A|529
7NWT|1|1|G|530
7NWT|1|1|C|531
*
7NWT|1|1|G|2018
7NWT|1|1|A|2019
7NWT|1|1|A|2020
7NWT|1|1|C|2021
7NWT|1|1|U|2022
7NWT|1|1|C|2023
*
7NWT|1|1|G|2040
7NWT|1|1|U|2041
7NWT|1|1|A|2042
7NWT|1|1|C|2043
*
7NWT|1|1|G|2625
7NWT|1|1|C|2626
7NWT|1|1|G|2627
7NWT|1|1|C|2628
7NWT|1|1|U|2629
7NWT|1|1|G|2630
*
7NWT|1|1|C|2788
7NWT|1|1|C|2789
*
7NWT|1|1|G|2894
7NWT|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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