3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7NWW|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWW|1|1|C|8
7NWW|1|1|G|9
7NWW|1|1|A|10
7NWW|1|1|C|11
7NWW|1|1|U|12
7NWW|1|1|A|13
7NWW|1|1|A|14
7NWW|1|1|G|15
*
7NWW|1|1|U|525
7NWW|1|1|A|526
7NWW|1|1|C|527
7NWW|1|1|A|528
7NWW|1|1|A|529
7NWW|1|1|G|530
7NWW|1|1|C|531
*
7NWW|1|1|G|2018
7NWW|1|1|A|2019
7NWW|1|1|A|2020
7NWW|1|1|C|2021
7NWW|1|1|U|2022
7NWW|1|1|C|2023
*
7NWW|1|1|G|2040
7NWW|1|1|U|2041
7NWW|1|1|A|2042
7NWW|1|1|C|2043
*
7NWW|1|1|G|2625
7NWW|1|1|C|2626
7NWW|1|1|G|2627
7NWW|1|1|C|2628
7NWW|1|1|U|2629
7NWW|1|1|G|2630
*
7NWW|1|1|C|2788
7NWW|1|1|C|2789
*
7NWW|1|1|G|2894
7NWW|1|1|G|2895

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain I
50S ribosomal protein L13
Chain P
50S ribosomal protein L20
Chain R
50S ribosomal protein L22
Chain a
50S ribosomal protein L32

Coloring options:

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