3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
7NWW|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWW|1|1|C|817
7NWW|1|1|G|818
7NWW|1|1|A|819
7NWW|1|1|A|820
7NWW|1|1|A|821
7NWW|1|1|G|822
*
7NWW|1|1|C|835
7NWW|1|1|G|836
7NWW|1|1|C|837
*
7NWW|1|1|G|942
7NWW|1|1|A|943
7NWW|1|1|C|944
7NWW|1|1|A|945
7NWW|1|1|C|946
*
7NWW|1|1|G|971
7NWW|1|1|A|972
7NWW|1|1|A|973
7NWW|1|1|G|974
7NWW|1|1|A|975
7NWW|1|1|G|976
*
7NWW|1|1|C|987
7NWW|1|1|A|988
7NWW|1|1|G|989
7NWW|1|1|A|990
7NWW|1|1|C|991
*
7NWW|1|1|G|1163
7NWW|1|1|C|1164
*
7NWW|1|1|G|1185
7NWW|1|1|G|1186
7NWW|1|1|G|1187
7NWW|1|1|U|1188
7NWW|1|1|A|1189
7NWW|1|1|G|1190

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain K
50S ribosomal protein L15
Chain P
50S ribosomal protein L20
Chain Q
50S ribosomal protein L21
Chain Y
50S ribosomal protein L30
Chain d
50S ribosomal protein L35

Coloring options:

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