J7_7O5B_001
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CGAAAU*AG*UCAG*CGAAAG*CAGAC*GA*UGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7O5B|1|X|A|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O5B|1|X|C|864
7O5B|1|X|G|865
7O5B|1|X|A|866
7O5B|1|X|A|867
7O5B|1|X|A|868
7O5B|1|X|U|869
*
7O5B|1|X|A|882
7O5B|1|X|G|883
*
7O5B|1|X|U|989
7O5B|1|X|C|990
7O5B|1|X|A|991
7O5B|1|X|G|992
*
7O5B|1|X|C|1017
7O5B|1|X|G|1018
7O5B|1|X|A|1019
7O5B|1|X|A|1020
7O5B|1|X|A|1021
7O5B|1|X|G|1022
*
7O5B|1|X|C|1033
7O5B|1|X|A|1034
7O5B|1|X|G|1035
7O5B|1|X|A|1036
7O5B|1|X|C|1037
*
7O5B|1|X|G|1209
7O5B|1|X|A|1210
*
7O5B|1|X|U|1226
7O5B|1|X|G|1227
7O5B|1|X|G|1228
7O5B|1|X|U|1229
7O5B|1|X|A|1230
7O5B|1|X|G|1231
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain Y
- 5S ribosomal RNA; 5S rRNA
- Chain i
- 50S ribosomal protein L15
- Chain n
- 50S ribosomal protein L20
- Chain o
- 50S ribosomal protein L21
- Chain x
- 50S ribosomal protein L30
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