J7_7ODE_001
3D structure
- PDB id
- 7ODE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome LiCl core particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 7ODE|1|I|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ODE|1|I|C|8
7ODE|1|I|G|9
7ODE|1|I|A|10
7ODE|1|I|C|11
7ODE|1|I|U|12
7ODE|1|I|A|13
7ODE|1|I|A|14
7ODE|1|I|G|15
*
7ODE|1|I|U|525
7ODE|1|I|A|526
7ODE|1|I|C|527
7ODE|1|I|A|528
7ODE|1|I|A|529
7ODE|1|I|G|530
7ODE|1|I|C|531
*
7ODE|1|I|G|2018
7ODE|1|I|A|2019
7ODE|1|I|A|2020
7ODE|1|I|C|2021
7ODE|1|I|U|2022
7ODE|1|I|C|2023
*
7ODE|1|I|G|2040
7ODE|1|I|U|2041
7ODE|1|I|A|2042
7ODE|1|I|C|2043
*
7ODE|1|I|G|2625
7ODE|1|I|C|2626
7ODE|1|I|G|2627
7ODE|1|I|C|2628
7ODE|1|I|U|2629
7ODE|1|I|G|2630
*
7ODE|1|I|C|2788
7ODE|1|I|C|2789
*
7ODE|1|I|G|2894
7ODE|1|I|G|2895
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L13
- Chain Y
- 50S ribosomal protein L20
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
Coloring options: