J7_7OHQ_001
3D structure
- PDB id
- 7OHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7OHQ|1|1|G|1116, 7OHQ|1|1|U|1144, 7OHQ|1|1|A|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHQ|1|1|C|949
7OHQ|1|1|G|950
7OHQ|1|1|A|951
7OHQ|1|1|A|952
7OHQ|1|1|G|953
7OHQ|1|1|U|954
*
7OHQ|1|1|A|967
7OHQ|1|1|G|968
*
7OHQ|1|1|U|1114
7OHQ|1|1|G|1115
7OHQ|1|1|G|1116
7OHQ|1|1|G|1117
*
7OHQ|1|1|C|1141
7OHQ|1|1|G|1142
7OHQ|1|1|A|1143
7OHQ|1|1|U|1144
7OHQ|1|1|G|1145
7OHQ|1|1|C|1146
*
7OHQ|1|1|G|1157
7OHQ|1|1|A|1158
7OHQ|1|1|A|1159
7OHQ|1|1|C|1160
7OHQ|1|1|G|1161
*
7OHQ|1|1|C|1338
7OHQ|1|1|C|1339
*
7OHQ|1|1|G|1365
7OHQ|1|1|A|1366
7OHQ|1|1|G|1367
7OHQ|1|1|U|1368
7OHQ|1|1|A|1369
7OHQ|1|1|G|1370
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain T
- 60S ribosomal protein L21-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
- Chain m
- Nucleolar GTP-binding protein 2
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