J7_7OHV_001
3D structure
- PDB id
- 7OHV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAAGUUUCC*GAUAG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 38 nucleotides
- Bulged bases
- 7OHV|1|1|A|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHV|1|1|C|949
7OHV|1|1|G|950
7OHV|1|1|A|951
7OHV|1|1|A|952
7OHV|1|1|G|953
7OHV|1|1|U|954
7OHV|1|1|U|955
7OHV|1|1|U|956
7OHV|1|1|C|957
7OHV|1|1|C|958
*
7OHV|1|1|G|964
7OHV|1|1|A|965
7OHV|1|1|U|966
7OHV|1|1|A|967
7OHV|1|1|G|968
*
7OHV|1|1|U|1114
7OHV|1|1|G|1115
7OHV|1|1|G|1116
7OHV|1|1|G|1117
*
7OHV|1|1|C|1141
7OHV|1|1|G|1142
7OHV|1|1|A|1143
7OHV|1|1|U|1144
7OHV|1|1|G|1145
7OHV|1|1|C|1146
*
7OHV|1|1|G|1157
7OHV|1|1|A|1158
7OHV|1|1|A|1159
7OHV|1|1|C|1160
7OHV|1|1|G|1161
*
7OHV|1|1|C|1338
7OHV|1|1|C|1339
*
7OHV|1|1|G|1365
7OHV|1|1|A|1366
7OHV|1|1|G|1367
7OHV|1|1|U|1368
7OHV|1|1|A|1369
7OHV|1|1|G|1370
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
Coloring options: