3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7OIG|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIG|1|1|C|8
7OIG|1|1|G|9
7OIG|1|1|A|10
7OIG|1|1|C|11
7OIG|1|1|U|12
7OIG|1|1|A|13
7OIG|1|1|A|14
7OIG|1|1|G|15
*
7OIG|1|1|U|525
7OIG|1|1|A|526
7OIG|1|1|C|527
7OIG|1|1|A|528
7OIG|1|1|A|529
7OIG|1|1|G|530
7OIG|1|1|C|531
*
7OIG|1|1|G|2018
7OIG|1|1|A|2019
7OIG|1|1|A|2020
7OIG|1|1|C|2021
7OIG|1|1|U|2022
7OIG|1|1|C|2023
*
7OIG|1|1|G|2040
7OIG|1|1|U|2041
7OIG|1|1|A|2042
7OIG|1|1|C|2043
*
7OIG|1|1|G|2625
7OIG|1|1|C|2626
7OIG|1|1|G|2627
7OIG|1|1|C|2628
7OIG|1|1|U|2629
7OIG|1|1|G|2630
*
7OIG|1|1|C|2788
7OIG|1|1|C|2789
*
7OIG|1|1|G|2894
7OIG|1|1|G|2895

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain I
50S ribosomal protein L13
Chain P
50S ribosomal protein L20
Chain R
50S ribosomal protein L22
Chain a
50S ribosomal protein L32

Coloring options:

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