J7_7OLD_001
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7OLD|1|1|G|1099
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OLD|1|1|C|931
7OLD|1|1|G|932
7OLD|1|1|A|933
7OLD|1|1|A|934
7OLD|1|1|G|935
7OLD|1|1|U|936
*
7OLD|1|1|A|949
7OLD|1|1|G|950
*
7OLD|1|1|U|1097
7OLD|1|1|G|1098
7OLD|1|1|G|1099
7OLD|1|1|G|1100
*
7OLD|1|1|C|1124
7OLD|1|1|G|1125
7OLD|1|1|A|1126
7OLD|1|1|U|1127
7OLD|1|1|G|1128
7OLD|1|1|C|1129
*
7OLD|1|1|G|1140
7OLD|1|1|A|1141
7OLD|1|1|A|1142
7OLD|1|1|C|1143
7OLD|1|1|G|1144
*
7OLD|1|1|C|1321
7OLD|1|1|C|1322
*
7OLD|1|1|G|1348
7OLD|1|1|A|1349
7OLD|1|1|G|1350
7OLD|1|1|U|1351
7OLD|1|1|A|1352
7OLD|1|1|G|1353
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LF
- 60S ribosomal protein l7-like protein
- Chain LL
- 60S ribosomal protein L13
- Chain LQ
- Ribosomal protein L18-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
- Chain La
- 60S ribosomal protein L28-like protein
- Chain Lb
- 60S ribosomal protein L29
- Chain Le
- 60S ribosomal protein L32-like protein
- Chain Lf
- 60S ribosomal protein l33-like protein
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