3D structure

PDB id
7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UGAAUAAG*UACAACA*UUAGUA*UUAC*GCGUUG*CC*GA
Length
35 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7P7Q|1|A|U|8
7P7Q|1|A|G|9
7P7Q|1|A|A|10
7P7Q|1|A|A|11
7P7Q|1|A|U|12
7P7Q|1|A|A|13
7P7Q|1|A|A|14
7P7Q|1|A|G|15
*
7P7Q|1|A|U|563
7P7Q|1|A|A|564
7P7Q|1|A|C|565
7P7Q|1|A|A|566
7P7Q|1|A|A|567
7P7Q|1|A|C|568
7P7Q|1|A|A|569
*
7P7Q|1|A|U|2031
7P7Q|1|A|U|2032
7P7Q|1|A|A|2033
7P7Q|1|A|G|2034
7P7Q|1|A|U|2035
7P7Q|1|A|A|2036
*
7P7Q|1|A|U|2053
7P7Q|1|A|U|2054
7P7Q|1|A|A|2055
7P7Q|1|A|C|2056
*
7P7Q|1|A|G|2638
7P7Q|1|A|C|2639
7P7Q|1|A|G|2640
7P7Q|1|A|U|2641
7P7Q|1|A|U|2642
7P7Q|1|A|G|2643
*
7P7Q|1|A|C|2801
7P7Q|1|A|C|2802
*
7P7Q|1|A|G|2903
7P7Q|1|A|A|2904

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L32
Chain H
50S ribosomal protein L3
Chain M
50S ribosomal protein L13
Chain T
50S ribosomal protein L20
Chain V
50S ribosomal protein L22

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1774 s