3D structure

PDB id
7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGAAAU*AG*UCAG*CGAAAG*CAGAC*GA*UGGUAG
Length
31 nucleotides
Bulged bases
7P7Q|1|A|A|984
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7P7Q|1|A|C|856
7P7Q|1|A|G|857
7P7Q|1|A|A|858
7P7Q|1|A|A|859
7P7Q|1|A|A|860
7P7Q|1|A|U|861
*
7P7Q|1|A|A|874
7P7Q|1|A|G|875
*
7P7Q|1|A|U|982
7P7Q|1|A|C|983
7P7Q|1|A|A|984
7P7Q|1|A|G|985
*
7P7Q|1|A|C|1010
7P7Q|1|A|G|1011
7P7Q|1|A|A|1012
7P7Q|1|A|A|1013
7P7Q|1|A|A|1014
7P7Q|1|A|G|1015
*
7P7Q|1|A|C|1026
7P7Q|1|A|A|1027
7P7Q|1|A|G|1028
7P7Q|1|A|A|1029
7P7Q|1|A|C|1030
*
7P7Q|1|A|G|1202
7P7Q|1|A|A|1203
*
7P7Q|1|A|U|1222
7P7Q|1|A|G|1223
7P7Q|1|A|G|1224
7P7Q|1|A|U|1225
7P7Q|1|A|A|1226
7P7Q|1|A|G|1227

Current chains

Chain A
23S rRNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain O
50S ribosomal protein L15
Chain T
50S ribosomal protein L20
Chain U
50S ribosomal protein L21

Coloring options:

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