3D structure

PDB id
7PJW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
7PJW|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJW|1|A|C|817
7PJW|1|A|G|818
7PJW|1|A|A|819
7PJW|1|A|A|820
7PJW|1|A|A|821
7PJW|1|A|G|822
*
7PJW|1|A|C|835
7PJW|1|A|G|836
7PJW|1|A|C|837
*
7PJW|1|A|G|942
7PJW|1|A|A|943
7PJW|1|A|C|944
7PJW|1|A|A|945
7PJW|1|A|C|946
*
7PJW|1|A|G|971
7PJW|1|A|A|972
7PJW|1|A|A|973
7PJW|1|A|G|974
7PJW|1|A|A|975
7PJW|1|A|G|976
*
7PJW|1|A|C|987
7PJW|1|A|A|988
7PJW|1|A|G|989
7PJW|1|A|A|990
7PJW|1|A|C|991
*
7PJW|1|A|G|1163
7PJW|1|A|C|1164
*
7PJW|1|A|G|1185
7PJW|1|A|G|1186
7PJW|1|A|G|1187
7PJW|1|A|U|1188
7PJW|1|A|A|1189
7PJW|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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