J7_7PJY_001

3D structure

PDB id

7PJY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7PJY|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJY|1|A|C|8
7PJY|1|A|G|9
7PJY|1|A|A|10
7PJY|1|A|C|11
7PJY|1|A|U|12
7PJY|1|A|A|13
7PJY|1|A|A|14
7PJY|1|A|G|15
*
7PJY|1|A|U|525
7PJY|1|A|A|526
7PJY|1|A|C|527
7PJY|1|A|A|528
7PJY|1|A|A|529
7PJY|1|A|G|530
7PJY|1|A|C|531
*
7PJY|1|A|G|2018
7PJY|1|A|A|2019
7PJY|1|A|A|2020
7PJY|1|A|C|2021
7PJY|1|A|U|2022
7PJY|1|A|C|2023
*
7PJY|1|A|G|2040
7PJY|1|A|U|2041
7PJY|1|A|A|2042
7PJY|1|A|C|2043
*
7PJY|1|A|G|2625
7PJY|1|A|C|2626
7PJY|1|A|G|2627
7PJY|1|A|C|2628
7PJY|1|A|U|2629
7PJY|1|A|G|2630
*
7PJY|1|A|C|2788
7PJY|1|A|C|2789
*
7PJY|1|A|G|2894
7PJY|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22