3D structure

PDB id
7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Candida albicans 80S ribosome in complex with anisomycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
Length
31 nucleotides
Bulged bases
7Q0P|1|1|G|1112
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Q0P|1|1|C|945
7Q0P|1|1|G|946
7Q0P|1|1|A|947
7Q0P|1|1|A|948
7Q0P|1|1|G|949
7Q0P|1|1|U|950
*
7Q0P|1|1|A|963
7Q0P|1|1|G|964
*
7Q0P|1|1|U|1110
7Q0P|1|1|G|1111
7Q0P|1|1|G|1112
7Q0P|1|1|G|1113
*
7Q0P|1|1|C|1137
7Q0P|1|1|G|1138
7Q0P|1|1|A|1139
7Q0P|1|1|U|1140
7Q0P|1|1|G|1141
7Q0P|1|1|C|1142
*
7Q0P|1|1|G|1153
7Q0P|1|1|A|1154
7Q0P|1|1|A|1155
7Q0P|1|1|C|1156
7Q0P|1|1|G|1157
*
7Q0P|1|1|C|1334
7Q0P|1|1|C|1335
*
7Q0P|1|1|G|1361
7Q0P|1|1|A|1362
7Q0P|1|1|G|1363
7Q0P|1|1|U|1364
7Q0P|1|1|A|1365
7Q0P|1|1|G|1366

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain 2
Ribosomal 60S subunit protein L21A
Chain 3
5S ribosomal RNA; 5S rRNA
Chain AB
Ribosomal 60S subunit protein L28
Chain AC
60S ribosomal protein L29
Chain AF
Ribosomal 60S subunit protein L32
Chain AG
Ribosomal 60S subunit protein L33A
Chain l
Ribosomal 60S subunit protein L4B
Chain o
Ribosomal 60S subunit protein L7A
Chain t
60S ribosomal protein L13
Chain y
Ribosomal 60S subunit protein L18A

Coloring options:

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