J7_7Q4K_001

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7Q4K|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Q4K|1|BA|C|8
7Q4K|1|BA|G|9
7Q4K|1|BA|A|10
7Q4K|1|BA|C|11
7Q4K|1|BA|U|12
7Q4K|1|BA|A|13
7Q4K|1|BA|A|14
7Q4K|1|BA|G|15
*
7Q4K|1|BA|U|525
7Q4K|1|BA|A|526
7Q4K|1|BA|C|527
7Q4K|1|BA|A|528
7Q4K|1|BA|A|529
7Q4K|1|BA|G|530
7Q4K|1|BA|C|531
*
7Q4K|1|BA|G|2018
7Q4K|1|BA|A|2019
7Q4K|1|BA|A|2020
7Q4K|1|BA|C|2021
7Q4K|1|BA|U|2022
7Q4K|1|BA|C|2023
*
7Q4K|1|BA|G|2040
7Q4K|1|BA|U|2041
7Q4K|1|BA|A|2042
7Q4K|1|BA|C|2043
*
7Q4K|1|BA|G|2625
7Q4K|1|BA|C|2626
7Q4K|1|BA|G|2627
7Q4K|1|BA|C|2628
7Q4K|1|BA|U|2629
7Q4K|1|BA|G|2630
*
7Q4K|1|BA|C|2788
7Q4K|1|BA|C|2789
*
7Q4K|1|BA|G|2894
7Q4K|1|BA|G|2895

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BJ

50S ribosomal protein L13

Chain BQ

50S ribosomal protein L20

Chain BS

50S ribosomal protein L22