J7_7QGN_001

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7QGN|1|N|C|2021

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QGN|1|N|C|8
7QGN|1|N|G|9
7QGN|1|N|A|10
7QGN|1|N|C|11
7QGN|1|N|U|12
7QGN|1|N|A|13
7QGN|1|N|A|14
7QGN|1|N|G|15
*
7QGN|1|N|U|525
7QGN|1|N|A|526
7QGN|1|N|C|527
7QGN|1|N|A|528
7QGN|1|N|A|529
7QGN|1|N|G|530
7QGN|1|N|C|531
*
7QGN|1|N|G|2018
7QGN|1|N|A|2019
7QGN|1|N|A|2020
7QGN|1|N|C|2021
7QGN|1|N|U|2022
7QGN|1|N|C|2023
*
7QGN|1|N|G|2040
7QGN|1|N|U|2041
7QGN|1|N|A|2042
7QGN|1|N|C|2043
*
7QGN|1|N|G|2625
7QGN|1|N|C|2626
7QGN|1|N|G|2627
7QGN|1|N|C|2628
7QGN|1|N|U|2629
7QGN|1|N|G|2630
*
7QGN|1|N|C|2788
7QGN|1|N|C|2789
*
7QGN|1|N|G|2894
7QGN|1|N|G|2895

Current chains

Chain N

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L3

Chain W

50S ribosomal protein L13

Chain d

50S ribosomal protein L20

Chain f

50S ribosomal protein L22

Chain n

50S ribosomal protein L32