3D structure

PDB id
7QGN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.37 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7QGN|1|N|A|945
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QGN|1|N|C|817
7QGN|1|N|G|818
7QGN|1|N|A|819
7QGN|1|N|A|820
7QGN|1|N|A|821
7QGN|1|N|G|822
*
7QGN|1|N|C|835
7QGN|1|N|G|836
7QGN|1|N|C|837
7QGN|1|N|C|838
*
7QGN|1|N|G|940
7QGN|1|N|A|941
7QGN|1|N|G|942
7QGN|1|N|A|943
7QGN|1|N|C|944
7QGN|1|N|A|945
7QGN|1|N|C|946
*
7QGN|1|N|G|971
7QGN|1|N|A|972
7QGN|1|N|A|973
7QGN|1|N|G|974
7QGN|1|N|A|975
7QGN|1|N|G|976
*
7QGN|1|N|C|987
7QGN|1|N|A|988
7QGN|1|N|G|989
7QGN|1|N|A|990
7QGN|1|N|C|991
*
7QGN|1|N|G|1163
7QGN|1|N|C|1164
*
7QGN|1|N|G|1185
7QGN|1|N|G|1186
7QGN|1|N|G|1187
7QGN|1|N|U|1188
7QGN|1|N|A|1189
7QGN|1|N|G|1190

Current chains

Chain N
23S rRNA

Nearby chains

Chain O
5S ribosomal RNA; 5S rRNA
Chain Y
50S ribosomal protein L15
Chain d
50S ribosomal protein L20
Chain e
50S ribosomal protein L21
Chain m
50S ribosomal protein L30
Chain q
50S ribosomal protein L35

Coloring options:

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