J7_7R7A_001
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGAAGUUU*AUAG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 35 nucleotides
- Bulged bases
- 7R7A|1|1|A|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7R7A|1|1|C|949
7R7A|1|1|G|950
7R7A|1|1|A|951
7R7A|1|1|A|952
7R7A|1|1|G|953
7R7A|1|1|U|954
7R7A|1|1|U|955
7R7A|1|1|U|956
*
7R7A|1|1|A|965
7R7A|1|1|U|966
7R7A|1|1|A|967
7R7A|1|1|G|968
*
7R7A|1|1|U|1114
7R7A|1|1|G|1115
7R7A|1|1|G|1116
7R7A|1|1|G|1117
*
7R7A|1|1|C|1141
7R7A|1|1|G|1142
7R7A|1|1|A|1143
7R7A|1|1|U|1144
7R7A|1|1|G|1145
7R7A|1|1|C|1146
*
7R7A|1|1|G|1157
7R7A|1|1|A|1158
7R7A|1|1|A|1159
7R7A|1|1|C|1160
7R7A|1|1|G|1161
*
7R7A|1|1|C|1338
7R7A|1|1|C|1339
*
7R7A|1|1|G|1365
7R7A|1|1|A|1366
7R7A|1|1|G|1367
7R7A|1|1|U|1368
7R7A|1|1|A|1369
7R7A|1|1|G|1370
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain J
- rRNA-processing protein EBP2
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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