J7_7RYF_001

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UAAUUAAG*UACAAGC*GAAAUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7RYF|1|A|A|2017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RYF|1|A|U|15
7RYF|1|A|A|16
7RYF|1|A|A|17
7RYF|1|A|U|18
7RYF|1|A|U|19
7RYF|1|A|A|20
7RYF|1|A|A|21
7RYF|1|A|G|22
*
7RYF|1|A|U|524
7RYF|1|A|A|525
7RYF|1|A|C|526
7RYF|1|A|A|527
7RYF|1|A|A|528
7RYF|1|A|G|529
7RYF|1|A|C|530
*
7RYF|1|A|G|2014
7RYF|1|A|A|2015
7RYF|1|A|A|2016
7RYF|1|A|A|2017
7RYF|1|A|U|2018
7RYF|1|A|C|2019
*
7RYF|1|A|G|2036
7RYF|1|A|U|2037
7RYF|1|A|A|2038
7RYF|1|A|C|2039
*
7RYF|1|A|G|2621
7RYF|1|A|C|2622
7RYF|1|A|G|2623
7RYF|1|A|C|2624
7RYF|1|A|U|2625
7RYF|1|A|G|2626
*
7RYF|1|A|C|2784
7RYF|1|A|C|2785
*
7RYF|1|A|G|2890
7RYF|1|A|G|2891

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain I

50S ribosomal protein L13

Chain P

50S ribosomal protein L20

Chain R

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32