J7_7RYG_001

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UAAUUAAG*UACAAGC*GAAAUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7RYG|1|A|A|2017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RYG|1|A|U|15
7RYG|1|A|A|16
7RYG|1|A|A|17
7RYG|1|A|U|18
7RYG|1|A|U|19
7RYG|1|A|A|20
7RYG|1|A|A|21
7RYG|1|A|G|22
*
7RYG|1|A|U|524
7RYG|1|A|A|525
7RYG|1|A|C|526
7RYG|1|A|A|527
7RYG|1|A|A|528
7RYG|1|A|G|529
7RYG|1|A|C|530
*
7RYG|1|A|G|2014
7RYG|1|A|A|2015
7RYG|1|A|A|2016
7RYG|1|A|A|2017
7RYG|1|A|U|2018
7RYG|1|A|C|2019
*
7RYG|1|A|G|2036
7RYG|1|A|U|2037
7RYG|1|A|A|2038
7RYG|1|A|C|2039
*
7RYG|1|A|G|2621
7RYG|1|A|C|2622
7RYG|1|A|G|2623
7RYG|1|A|C|2624
7RYG|1|A|U|2625
7RYG|1|A|G|2626
*
7RYG|1|A|C|2784
7RYG|1|A|C|2785
*
7RYG|1|A|G|2890
7RYG|1|A|G|2891

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain I

50S ribosomal protein L13

Chain P

50S ribosomal protein L20

Chain R

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32