3D structure

PDB id
7S1G (explore in PDB, NAKB, or RNA 3D Hub)
Description
wild-type Escherichia coli stalled ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7S1G|1|I|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7S1G|1|I|C|817
7S1G|1|I|G|818
7S1G|1|I|A|819
7S1G|1|I|A|820
7S1G|1|I|A|821
7S1G|1|I|G|822
*
7S1G|1|I|C|835
7S1G|1|I|G|836
7S1G|1|I|C|837
7S1G|1|I|C|838
*
7S1G|1|I|G|940
7S1G|1|I|A|941
7S1G|1|I|G|942
7S1G|1|I|A|943
7S1G|1|I|C|944
7S1G|1|I|A|945
7S1G|1|I|C|946
*
7S1G|1|I|G|971
7S1G|1|I|A|972
7S1G|1|I|A|973
7S1G|1|I|G|974
7S1G|1|I|A|975
7S1G|1|I|G|976
*
7S1G|1|I|C|987
7S1G|1|I|A|988
7S1G|1|I|G|989
7S1G|1|I|A|990
7S1G|1|I|C|991
*
7S1G|1|I|G|1163
7S1G|1|I|C|1164
*
7S1G|1|I|G|1185
7S1G|1|I|G|1186
7S1G|1|I|G|1187
7S1G|1|I|U|1188
7S1G|1|I|A|1189
7S1G|1|I|G|1190

Current chains

Chain I
23S rRNA

Nearby chains

Chain J
5S ribosomal RNA; 5S rRNA
Chain T
50S ribosomal protein L15
Chain Y
50S ribosomal protein L20
Chain Z
50S ribosomal protein L21
Chain h
50S ribosomal protein L30
Chain l
50S ribosomal protein L35

Coloring options:

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