3D structure

PDB id
7SSN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7SSN|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SSN|1|1|C|8
7SSN|1|1|G|9
7SSN|1|1|A|10
7SSN|1|1|C|11
7SSN|1|1|U|12
7SSN|1|1|A|13
7SSN|1|1|A|14
7SSN|1|1|G|15
*
7SSN|1|1|U|525
7SSN|1|1|A|526
7SSN|1|1|C|527
7SSN|1|1|A|528
7SSN|1|1|A|529
7SSN|1|1|G|530
7SSN|1|1|C|531
*
7SSN|1|1|G|2018
7SSN|1|1|A|2019
7SSN|1|1|A|2020
7SSN|1|1|C|2021
7SSN|1|1|U|2022
7SSN|1|1|C|2023
*
7SSN|1|1|G|2040
7SSN|1|1|U|2041
7SSN|1|1|A|2042
7SSN|1|1|C|2043
*
7SSN|1|1|G|2625
7SSN|1|1|C|2626
7SSN|1|1|G|2627
7SSN|1|1|C|2628
7SSN|1|1|U|2629
7SSN|1|1|G|2630
*
7SSN|1|1|C|2788
7SSN|1|1|C|2789
*
7SSN|1|1|G|2894
7SSN|1|1|G|2895

Current chains

Chain 1
23S rRNA

Nearby chains

Chain B
50S ribosomal protein L32
Chain c
50S ribosomal protein L3
Chain j
50S ribosomal protein L13
Chain q
50S ribosomal protein L20
Chain s
50S ribosomal protein L22

Coloring options:

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