J7_7UCK_001
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAAAGU*AG*UGGG*CGCU(OMG)C*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7UCK|1|5|G|1854
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCK|1|5|C|1666
7UCK|1|5|A|1667
7UCK|1|5|A|1668
7UCK|1|5|A|1669
7UCK|1|5|G|1670
7UCK|1|5|U|1671
*
7UCK|1|5|A|1684
7UCK|1|5|G|1685
*
7UCK|1|5|U|1852
7UCK|1|5|G|1853
7UCK|1|5|G|1854
7UCK|1|5|G|1855
*
7UCK|1|5|C|1879
7UCK|1|5|G|1880
7UCK|1|5|C|1881
7UCK|1|5|U|1882
7UCK|1|5|OMG|1883
7UCK|1|5|C|1884
*
7UCK|1|5|G|1895
7UCK|1|5|A|1896
7UCK|1|5|A|1897
7UCK|1|5|C|1898
7UCK|1|5|G|1899
*
7UCK|1|5|C|2077
7UCK|1|5|C|2078
*
7UCK|1|5|G|2278
7UCK|1|5|A|2279
7UCK|1|5|G|2280
7UCK|1|5|U|2281
7UCK|1|5|A|2282
7UCK|1|5|G|2283
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein L4
- Chain F
- 60S ribosomal protein L7
- Chain L
- 60S ribosomal protein L13
- Chain Q
- 60S ribosomal protein L18
- Chain T
- 60S ribosomal protein L21
- Chain a
- 60S ribosomal protein L27a
- Chain b
- 60S ribosomal protein L29
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L35a
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