3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7UG7|1|23|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UG7|1|23|C|817
7UG7|1|23|G|818
7UG7|1|23|A|819
7UG7|1|23|A|820
7UG7|1|23|A|821
7UG7|1|23|G|822
*
7UG7|1|23|C|835
7UG7|1|23|G|836
7UG7|1|23|C|837
7UG7|1|23|C|838
*
7UG7|1|23|G|940
7UG7|1|23|A|941
7UG7|1|23|G|942
7UG7|1|23|A|943
7UG7|1|23|C|944
7UG7|1|23|A|945
7UG7|1|23|C|946
*
7UG7|1|23|G|971
7UG7|1|23|A|972
7UG7|1|23|A|973
7UG7|1|23|G|974
7UG7|1|23|A|975
7UG7|1|23|G|976
*
7UG7|1|23|C|987
7UG7|1|23|A|988
7UG7|1|23|G|989
7UG7|1|23|A|990
7UG7|1|23|C|991
*
7UG7|1|23|G|1163
7UG7|1|23|C|1164
*
7UG7|1|23|G|1185
7UG7|1|23|G|1186
7UG7|1|23|G|1187
7UG7|1|23|U|1188
7UG7|1|23|A|1189
7UG7|1|23|G|1190

Current chains

Chain 23
23S rRNA

Nearby chains

Chain 5
5S ribosomal RNA; 5S rRNA
Chain LO
50S ribosomal protein L15
Chain LT
50S ribosomal protein L20
Chain LU
Ribosomal protein L21
Chain Ld
50S ribosomal protein L30
Chain Li
50S ribosomal protein L35

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2056 s