3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
UGAAGAAG*UACAAGC*GAAAUC*GUAU*ACGUUU*AC*GG
Length
35 nucleotides
Bulged bases
7UNW|1|A|A|2008
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UNW|1|A|U|8
7UNW|1|A|G|9
7UNW|1|A|A|10
7UNW|1|A|A|11
7UNW|1|A|G|12
7UNW|1|A|A|13
7UNW|1|A|A|14
7UNW|1|A|G|15
*
7UNW|1|A|U|516
7UNW|1|A|A|517
7UNW|1|A|C|518
7UNW|1|A|A|519
7UNW|1|A|A|520
7UNW|1|A|G|521
7UNW|1|A|C|522
*
7UNW|1|A|G|2005
7UNW|1|A|A|2006
7UNW|1|A|A|2007
7UNW|1|A|A|2008
7UNW|1|A|U|2009
7UNW|1|A|C|2010
*
7UNW|1|A|G|2027
7UNW|1|A|U|2028
7UNW|1|A|A|2029
7UNW|1|A|U|2030
*
7UNW|1|A|A|2612
7UNW|1|A|C|2613
7UNW|1|A|G|2614
7UNW|1|A|U|2615
7UNW|1|A|U|2616
7UNW|1|A|U|2617
*
7UNW|1|A|A|2775
7UNW|1|A|C|2776
*
7UNW|1|A|G|2881
7UNW|1|A|G|2882

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain L
50S ribosomal protein L13
Chain S
50S ribosomal protein L20
Chain U
50S ribosomal protein L22

Coloring options:

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