3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAAAG*CAGAC*GG*CGGUAG
Length
36 nucleotides
Bulged bases
7UNW|1|A|A|935
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UNW|1|A|C|807
7UNW|1|A|G|808
7UNW|1|A|A|809
7UNW|1|A|A|810
7UNW|1|A|A|811
7UNW|1|A|G|812
*
7UNW|1|A|C|825
7UNW|1|A|G|826
7UNW|1|A|C|827
7UNW|1|A|C|828
*
7UNW|1|A|G|930
7UNW|1|A|A|931
7UNW|1|A|G|932
7UNW|1|A|A|933
7UNW|1|A|C|934
7UNW|1|A|A|935
7UNW|1|A|C|936
*
7UNW|1|A|G|961
7UNW|1|A|A|962
7UNW|1|A|A|963
7UNW|1|A|A|964
7UNW|1|A|A|965
7UNW|1|A|G|966
*
7UNW|1|A|C|977
7UNW|1|A|A|978
7UNW|1|A|G|979
7UNW|1|A|A|980
7UNW|1|A|C|981
*
7UNW|1|A|G|1154
7UNW|1|A|G|1155
*
7UNW|1|A|C|1172
7UNW|1|A|G|1173
7UNW|1|A|G|1174
7UNW|1|A|U|1175
7UNW|1|A|A|1176
7UNW|1|A|G|1177

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain N
50S ribosomal protein L15
Chain S
50S ribosomal protein L20
Chain T
50S ribosomal protein L21

Coloring options:

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