3D structure

PDB id
7YLA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of 50S-HflX complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.52 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7YLA|1|I|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7YLA|1|I|C|817
7YLA|1|I|G|818
7YLA|1|I|A|819
7YLA|1|I|A|820
7YLA|1|I|A|821
7YLA|1|I|G|822
*
7YLA|1|I|C|835
7YLA|1|I|G|836
7YLA|1|I|C|837
7YLA|1|I|C|838
*
7YLA|1|I|G|940
7YLA|1|I|A|941
7YLA|1|I|G|942
7YLA|1|I|A|943
7YLA|1|I|C|944
7YLA|1|I|A|945
7YLA|1|I|C|946
*
7YLA|1|I|G|971
7YLA|1|I|A|972
7YLA|1|I|A|973
7YLA|1|I|G|974
7YLA|1|I|A|975
7YLA|1|I|G|976
*
7YLA|1|I|C|987
7YLA|1|I|A|988
7YLA|1|I|G|989
7YLA|1|I|A|990
7YLA|1|I|C|991
*
7YLA|1|I|G|1163
7YLA|1|I|C|1164
*
7YLA|1|I|G|1185
7YLA|1|I|G|1186
7YLA|1|I|G|1187
7YLA|1|I|U|1188
7YLA|1|I|A|1189
7YLA|1|I|G|1190

Current chains

Chain I
Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain J
5S ribosomal RNA; 5S rRNA
Chain T
50S ribosomal protein L15
Chain Y
50S ribosomal protein L20
Chain Z
50S ribosomal protein L21
Chain h
50S ribosomal protein L30
Chain l
50S ribosomal protein L35

Coloring options:

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