J7_7ZOD_002
3D structure
- PDB id
- 7ZOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 7ZOD|1|b|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZOD|1|b|C|817
7ZOD|1|b|G|818
7ZOD|1|b|A|819
7ZOD|1|b|A|820
7ZOD|1|b|A|821
7ZOD|1|b|G|822
*
7ZOD|1|b|C|835
7ZOD|1|b|G|836
7ZOD|1|b|C|837
7ZOD|1|b|C|838
*
7ZOD|1|b|G|940
7ZOD|1|b|A|941
7ZOD|1|b|G|942
7ZOD|1|b|A|943
7ZOD|1|b|C|944
7ZOD|1|b|A|945
7ZOD|1|b|C|946
*
7ZOD|1|b|G|971
7ZOD|1|b|A|972
7ZOD|1|b|A|973
7ZOD|1|b|G|974
7ZOD|1|b|A|975
7ZOD|1|b|G|976
*
7ZOD|1|b|C|987
7ZOD|1|b|A|988
7ZOD|1|b|G|989
7ZOD|1|b|A|990
7ZOD|1|b|C|991
*
7ZOD|1|b|G|1163
7ZOD|1|b|C|1164
*
7ZOD|1|b|G|1185
7ZOD|1|b|G|1186
7ZOD|1|b|G|1187
7ZOD|1|b|U|1188
7ZOD|1|b|A|1189
7ZOD|1|b|G|1190
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L30
- Chain 7
- 50S ribosomal protein L35
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain l
- 50S ribosomal protein L15
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
Coloring options: