J7_8A3D_001
3D structure
- PDB id
- 8A3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8A3D|1|A|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8A3D|1|A|C|1666
8A3D|1|A|G|1667
8A3D|1|A|A|1668
8A3D|1|A|A|1669
8A3D|1|A|G|1670
8A3D|1|A|U|1671
*
8A3D|1|A|A|1684
8A3D|1|A|G|1685
*
8A3D|1|A|U|1852
8A3D|1|A|G|1853
8A3D|1|A|G|1854
8A3D|1|A|G|1855
*
8A3D|1|A|C|1879
8A3D|1|A|G|1880
8A3D|1|A|C|1881
8A3D|1|A|U|1882
8A3D|1|A|G|1883
8A3D|1|A|C|1884
*
8A3D|1|A|G|1895
8A3D|1|A|A|1896
8A3D|1|A|A|1897
8A3D|1|A|C|1898
8A3D|1|A|G|1899
*
8A3D|1|A|C|2077
8A3D|1|A|C|2078
*
8A3D|1|A|G|2278
8A3D|1|A|A|2279
8A3D|1|A|G|2280
8A3D|1|A|U|2281
8A3D|1|A|A|2282
8A3D|1|A|G|2283
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 60S ribosomal protein L4
- Chain K
- 60S ribosomal protein L18
- Chain N
- 60S ribosomal protein L21
- Chain U
- 60S ribosomal protein L27a
- Chain V
- 60S ribosomal protein L29
- Chain Y
- 60S ribosomal protein L32
- Chain Z
- 60S ribosomal protein L35a
- Chain m
- 60S ribosomal protein L7
- Chain r
- 60S ribosomal protein L13
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