J7_8B6C_001
3D structure
- PDB id
- 8B6C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- CAAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8B6C|1|5|G|1793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B6C|1|5|C|1621
8B6C|1|5|A|1622
8B6C|1|5|A|1623
8B6C|1|5|A|1624
8B6C|1|5|G|1625
8B6C|1|5|U|1626
*
8B6C|1|5|A|1639
8B6C|1|5|G|1640
*
8B6C|1|5|U|1791
8B6C|1|5|G|1792
8B6C|1|5|G|1793
8B6C|1|5|G|1794
*
8B6C|1|5|C|1818
8B6C|1|5|G|1819
8B6C|1|5|C|1820
8B6C|1|5|U|1821
8B6C|1|5|G|1822
8B6C|1|5|C|1823
*
8B6C|1|5|G|1834
8B6C|1|5|A|1835
8B6C|1|5|A|1836
8B6C|1|5|C|1837
8B6C|1|5|G|1838
*
8B6C|1|5|C|2016
8B6C|1|5|C|2017
*
8B6C|1|5|G|2121
8B6C|1|5|A|2122
8B6C|1|5|G|2123
8B6C|1|5|U|2124
8B6C|1|5|A|2125
8B6C|1|5|G|2126
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein L4
- Chain F
- 60S ribosomal protein L7
- Chain L
- 60S ribosomal protein L13
- Chain Q
- eL18
- Chain T
- 60S ribosomal protein L21
- Chain a
- 60S ribosomal protein L27a
- Chain b
- 60S ribosomal protein L29
- Chain e
- Ribosomal protein L32
- Chain f
- 60S ribosomal protein L35a
Coloring options: