J7_8B7Y_001
3D structure
- PDB id
- 8B7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 8B7Y|1|I|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B7Y|1|I|C|8
8B7Y|1|I|G|9
8B7Y|1|I|A|10
8B7Y|1|I|C|11
8B7Y|1|I|U|12
8B7Y|1|I|A|13
8B7Y|1|I|A|14
8B7Y|1|I|G|15
*
8B7Y|1|I|U|525
8B7Y|1|I|A|526
8B7Y|1|I|C|527
8B7Y|1|I|A|528
8B7Y|1|I|A|529
8B7Y|1|I|G|530
8B7Y|1|I|C|531
*
8B7Y|1|I|G|2018
8B7Y|1|I|A|2019
8B7Y|1|I|A|2020
8B7Y|1|I|C|2021
8B7Y|1|I|U|2022
8B7Y|1|I|C|2023
*
8B7Y|1|I|G|2040
8B7Y|1|I|U|2041
8B7Y|1|I|A|2042
8B7Y|1|I|C|2043
*
8B7Y|1|I|G|2625
8B7Y|1|I|C|2626
8B7Y|1|I|G|2627
8B7Y|1|I|C|2628
8B7Y|1|I|U|2629
8B7Y|1|I|G|2630
*
8B7Y|1|I|C|2788
8B7Y|1|I|C|2789
*
8B7Y|1|I|G|2894
8B7Y|1|I|G|2895
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L13
- Chain Y
- 50S ribosomal protein L20
- Chain Z
- 50S ribosomal protein L21
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
Coloring options: