J7_8BHN_001

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUGG*CCC*GG

Length

37 nucleotides

Bulged bases

8BHN|1|0|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHN|1|0|C|8
8BHN|1|0|G|9
8BHN|1|0|A|10
8BHN|1|0|C|11
8BHN|1|0|U|12
8BHN|1|0|A|13
8BHN|1|0|A|14
8BHN|1|0|G|15
*
8BHN|1|0|U|525
8BHN|1|0|A|526
8BHN|1|0|C|527
8BHN|1|0|A|528
8BHN|1|0|A|529
8BHN|1|0|G|530
8BHN|1|0|C|531
*
8BHN|1|0|G|2018
8BHN|1|0|A|2019
8BHN|1|0|A|2020
8BHN|1|0|C|2021
8BHN|1|0|U|2022
8BHN|1|0|C|2023
*
8BHN|1|0|G|2040
8BHN|1|0|U|2041
8BHN|1|0|A|2042
8BHN|1|0|C|2043
*
8BHN|1|0|G|2625
8BHN|1|0|C|2626
8BHN|1|0|G|2627
8BHN|1|0|C|2628
8BHN|1|0|U|2629
8BHN|1|0|G|2630
8BHN|1|0|G|2631
*
8BHN|1|0|C|2787
8BHN|1|0|C|2788
8BHN|1|0|C|2789
*
8BHN|1|0|G|2894
8BHN|1|0|G|2895

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20

Chain P

50S ribosomal protein L22

Chain a

50S ribosomal protein L32