3D structure

PDB id
8BHN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8BHN|1|0|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BHN|1|0|C|817
8BHN|1|0|G|818
8BHN|1|0|A|819
8BHN|1|0|A|820
8BHN|1|0|A|821
8BHN|1|0|G|822
*
8BHN|1|0|C|835
8BHN|1|0|G|836
8BHN|1|0|C|837
8BHN|1|0|C|838
*
8BHN|1|0|G|940
8BHN|1|0|A|941
8BHN|1|0|G|942
8BHN|1|0|A|943
8BHN|1|0|C|944
8BHN|1|0|A|945
8BHN|1|0|C|946
*
8BHN|1|0|G|971
8BHN|1|0|A|972
8BHN|1|0|A|973
8BHN|1|0|G|974
8BHN|1|0|A|975
8BHN|1|0|G|976
*
8BHN|1|0|C|987
8BHN|1|0|A|988
8BHN|1|0|G|989
8BHN|1|0|A|990
8BHN|1|0|C|991
*
8BHN|1|0|G|1163
8BHN|1|0|C|1164
*
8BHN|1|0|G|1185
8BHN|1|0|G|1186
8BHN|1|0|G|1187
8BHN|1|0|U|1188
8BHN|1|0|A|1189
8BHN|1|0|G|1190

Current chains

Chain 0
23S rRNA RRLG-RRNA

Nearby chains

Chain 1
5S ribosomal RNA; 5S rRNA
Chain I
50S ribosomal protein L15
Chain N
50S ribosomal protein L20
Chain O
50S ribosomal protein L21
Chain W
50S ribosomal protein L30
Chain d
50S ribosomal protein L35

Coloring options:

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