3D structure

PDB id
8BHP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.37 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
8BHP|1|0|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BHP|1|0|C|8
8BHP|1|0|G|9
8BHP|1|0|A|10
8BHP|1|0|C|11
8BHP|1|0|U|12
8BHP|1|0|A|13
8BHP|1|0|A|14
8BHP|1|0|G|15
*
8BHP|1|0|U|525
8BHP|1|0|A|526
8BHP|1|0|C|527
8BHP|1|0|A|528
8BHP|1|0|A|529
8BHP|1|0|G|530
8BHP|1|0|C|531
*
8BHP|1|0|G|2018
8BHP|1|0|A|2019
8BHP|1|0|A|2020
8BHP|1|0|C|2021
8BHP|1|0|U|2022
8BHP|1|0|C|2023
*
8BHP|1|0|G|2040
8BHP|1|0|U|2041
8BHP|1|0|A|2042
8BHP|1|0|C|2043
*
8BHP|1|0|G|2625
8BHP|1|0|C|2626
8BHP|1|0|G|2627
8BHP|1|0|C|2628
8BHP|1|0|U|2629
8BHP|1|0|G|2630
*
8BHP|1|0|C|2788
8BHP|1|0|C|2789
*
8BHP|1|0|G|2894
8BHP|1|0|G|2895

Current chains

Chain 0
23S rRNA RRLG-RRNA

Nearby chains

Chain B
50S ribosomal protein L3
Chain G
50S ribosomal protein L13
Chain N
50S ribosomal protein L20
Chain P
50S ribosomal protein L22
Chain a
50S ribosomal protein L32

Coloring options:

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