J7_8BHP_003

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

8BHP|1|0|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHP|1|0|C|817
8BHP|1|0|G|818
8BHP|1|0|A|819
8BHP|1|0|A|820
8BHP|1|0|A|821
8BHP|1|0|G|822
*
8BHP|1|0|C|835
8BHP|1|0|G|836
8BHP|1|0|C|837
8BHP|1|0|C|838
*
8BHP|1|0|G|940
8BHP|1|0|A|941
8BHP|1|0|G|942
8BHP|1|0|A|943
8BHP|1|0|C|944
8BHP|1|0|A|945
8BHP|1|0|C|946
*
8BHP|1|0|G|971
8BHP|1|0|A|972
8BHP|1|0|A|973
8BHP|1|0|G|974
8BHP|1|0|A|975
8BHP|1|0|G|976
*
8BHP|1|0|C|987
8BHP|1|0|A|988
8BHP|1|0|G|989
8BHP|1|0|A|990
8BHP|1|0|C|991
*
8BHP|1|0|G|1163
8BHP|1|0|C|1164
*
8BHP|1|0|G|1185
8BHP|1|0|G|1186
8BHP|1|0|G|1187
8BHP|1|0|U|1188
8BHP|1|0|A|1189
8BHP|1|0|G|1190

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 1

5S ribosomal RNA; 5S rRNA

Chain I

50S ribosomal protein L15

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain W

50S ribosomal protein L30

Chain d

50S ribosomal protein L35