J7_8BTK_001
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CG(OMC)UGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8BTK|1|B5|G|1793
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BTK|1|B5|C|1621
8BTK|1|B5|G|1622
8BTK|1|B5|A|1623
8BTK|1|B5|A|1624
8BTK|1|B5|G|1625
8BTK|1|B5|U|1626
*
8BTK|1|B5|A|1639
8BTK|1|B5|G|1640
*
8BTK|1|B5|U|1791
8BTK|1|B5|G|1792
8BTK|1|B5|G|1793
8BTK|1|B5|G|1794
*
8BTK|1|B5|C|1818
8BTK|1|B5|G|1819
8BTK|1|B5|OMC|1820
8BTK|1|B5|U|1821
8BTK|1|B5|G|1822
8BTK|1|B5|C|1823
*
8BTK|1|B5|G|1834
8BTK|1|B5|A|1835
8BTK|1|B5|A|1836
8BTK|1|B5|C|1837
8BTK|1|B5|G|1838
*
8BTK|1|B5|C|2016
8BTK|1|B5|C|2017
*
8BTK|1|B5|G|2121
8BTK|1|B5|A|2122
8BTK|1|B5|G|2123
8BTK|1|B5|U|2124
8BTK|1|B5|A|2125
8BTK|1|B5|G|2126
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B7
- 5S ribosomal RNA; 5S rRNA
- Chain BC
- 60S ribosomal protein L4
- Chain BF
- uL30,60S ribosomal protein L7
- Chain BL
- L13
- Chain BQ
- eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bb
- 60S ribosomal protein L29
- Chain Be
- eL32
- Chain Bf
- 60S ribosomal protein L35a
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